# Articles on computational, digital, and mathematical pathology

#### The benefits of building and working with interactive simulations Interactive simulations for better model intuition

{% embed url="<http://blog.mathematical-oncology.org/benefits-of-building-interactive-simulations.html>" %}

[**Paradoxical Dependencies of Tumor Dormancy and Progression on Basic Cell Kinetics**. Heiko Enderling, Alexander R.A. Anderson, Mark A.J. Chaplain, Afshin Beheshti, Lynn Hlatky and Philip Hahnfeldt. Cancer Res November 15 2009 (69) (22) 8814-8821; DOI: 10.1158/0008-5472.CAN-09-2115](https://cancerres.aacrjournals.org/content/69/22/8814.long)

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#### Survival Prediction in Pancreatic Ductal Adenocarcinoma by Quantitative Computed Tomography Image Analysis

{% embed url="<https://link.springer.com/article/10.1245/s10434-017-6323-3>" %}

* [CompPath Lecture Series 2016-2017 Semester](https://www.youtube.com/playlist?list=PLwdWByS9hJ3IpNyN1Ge4dbfSV43296jLn)

CompPath Dr. Shikhar Uttam, Ph.D. Lecture (April 14th 2017)

<https://www.youtube.com/watch?v=6NFyB19D_fU&list=PLwdWByS9hJ3IpNyN1Ge4dbfSV43296jLn&index=2>

* [Foundations of Computational and Systems Biology](https://ocw.mit.edu/courses/biology/7-91j-foundations-of-computational-and-systems-biology-spring-2014)

<https://ocw.mit.edu/courses/biology/7-91j-foundations-of-computational-and-systems-biology-spring-2014/video-lectures/>

1. Introduction to Computational and Systems Biology

   <https://youtu.be/lJzybEXmIj0>
2. Local Alignment (BLAST) and Statistics

<https://www.youtube.com/watch?time_continue=6&v=6Udqou3vmng>

<https://www.youtube.com/results?search_query=Philips+healthcare+pathology>

* Biologists would love to program cells as if they were computer chips

<https://www.technologyreview.com/s/609663/biologists-would-love-to-program-cells-as-if-they-were-computer-chips/>

* Using the principles of evolution to treat and prevent cancer

<https://www.statnews.com/2018/06/27/cancer-treatment-prevention-evolution/>

* [CompPath Lecture Series 2016-2017 Semester](https://www.youtube.com/playlist?list=PLwdWByS9hJ3IpNyN1Ge4dbfSV43296jLn)

CompPath Dr. Shikhar Uttam, Ph.D. Lecture (April 14th 2017)

<https://www.youtube.com/watch?v=6NFyB19D_fU&list=PLwdWByS9hJ3IpNyN1Ge4dbfSV43296jLn&index=2>

* [Foundations of Computational and Systems Biology](https://ocw.mit.edu/courses/biology/7-91j-foundations-of-computational-and-systems-biology-spring-2014)

<https://ocw.mit.edu/courses/biology/7-91j-foundations-of-computational-and-systems-biology-spring-2014/video-lectures/>

1. Introduction to Computational and Systems Biology

   <https://youtu.be/lJzybEXmIj0>
2. Local Alignment (BLAST) and Statistics

<https://www.youtube.com/watch?time_continue=6&v=6Udqou3vmng>

<https://www.youtube.com/results?search_query=Philips+healthcare+pathology>

* Biologists would love to program cells as if they were computer chips

<https://www.technologyreview.com/s/609663/biologists-would-love-to-program-cells-as-if-they-were-computer-chips/>

* Using the principles of evolution to treat and prevent cancer

<https://www.statnews.com/2018/06/27/cancer-treatment-prevention-evolution/>

* [CompPath Lecture Series 2016-2017 Semester](https://www.youtube.com/playlist?list=PLwdWByS9hJ3IpNyN1Ge4dbfSV43296jLn)

CompPath Dr. Shikhar Uttam, Ph.D. Lecture (April 14th 2017)

<https://www.youtube.com/watch?v=6NFyB19D_fU&list=PLwdWByS9hJ3IpNyN1Ge4dbfSV43296jLn&index=2>

* [Foundations of Computational and Systems Biology](https://ocw.mit.edu/courses/biology/7-91j-foundations-of-computational-and-systems-biology-spring-2014)

<https://ocw.mit.edu/courses/biology/7-91j-foundations-of-computational-and-systems-biology-spring-2014/video-lectures/>

1. Introduction to Computational and Systems Biology

   <https://youtu.be/lJzybEXmIj0>
2. Local Alignment (BLAST) and Statistics

<https://www.youtube.com/watch?time_continue=6&v=6Udqou3vmng>

<https://www.youtube.com/results?search_query=Philips+healthcare+pathology>

* [CompPath Lecture Series 2016-2017 Semester](https://www.youtube.com/playlist?list=PLwdWByS9hJ3IpNyN1Ge4dbfSV43296jLn)

CompPath Dr. Shikhar Uttam, Ph.D. Lecture (April 14th 2017)

<https://www.youtube.com/watch?v=6NFyB19D_fU&list=PLwdWByS9hJ3IpNyN1Ge4dbfSV43296jLn&index=2>

* [Foundations of Computational and Systems Biology](https://ocw.mit.edu/courses/biology/7-91j-foundations-of-computational-and-systems-biology-spring-2014)

<https://ocw.mit.edu/courses/biology/7-91j-foundations-of-computational-and-systems-biology-spring-2014/video-lectures/>

1. Introduction to Computational and Systems Biology

   <https://youtu.be/lJzybEXmIj0>
2. Local Alignment (BLAST) and Statistics

<https://www.youtube.com/watch?time_continue=6&v=6Udqou3vmng>

<https://www.youtube.com/results?search_query=Philips+healthcare+pathology>

## Computational, Digital & Mathematical Pathology

* [CompPath Lecture Series 2016-2017 Semester](https://www.youtube.com/playlist?list=PLwdWByS9hJ3IpNyN1Ge4dbfSV43296jLn)

CompPath Dr. Shikhar Uttam, Ph.D. Lecture (April 14th 2017)

<https://www.youtube.com/watch?v=6NFyB19D_fU&list=PLwdWByS9hJ3IpNyN1Ge4dbfSV43296jLn&index=2>

* [Foundations of Computational and Systems Biology](https://ocw.mit.edu/courses/biology/7-91j-foundations-of-computational-and-systems-biology-spring-2014)

<https://ocw.mit.edu/courses/biology/7-91j-foundations-of-computational-and-systems-biology-spring-2014/video-lectures/>

1. Introduction to Computational and Systems Biology

   <https://youtu.be/lJzybEXmIj0>
2. Local Alignment (BLAST) and Statistics

<https://www.youtube.com/watch?time_continue=6&v=6Udqou3vmng>

<https://www.youtube.com/results?search_query=Philips+healthcare+pathology>

* Biologists would love to program cells as if they were computer chips

<https://www.technologyreview.com/s/609663/biologists-would-love-to-program-cells-as-if-they-were-computer-chips/>

* Using the principles of evolution to treat and prevent cancer

<https://www.statnews.com/2018/06/27/cancer-treatment-prevention-evolution/>